Difference: Applications (18 vs. 19)

Revision 192012-10-13 - RobertoAlfieri

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MPI-multicore: Applications

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Requirements Outline:

Changed:
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GAIA Einstein-Tk NEMO NAMD QuantumEpresso RegCM
1 - Parallelization Model (MPI, openMP, Hybrid, GPU, .. )
MPI/openMP MPI/openMP MPI/openMP MPI/openMP MPI/openMP GPU MPI
2- CPU requirements (1-10 WholeNodes, 16-24 CPUs, ..)
8-64 WholeNodes 1-64 WholeNodes SingleNode or Multinode with SharedHome 1-1024 WholeNodes 8-128 WN 1
3 - Memory requirements ( No, 1-2 GB per core, Memory-Bound=whole avail. mem. )
Mem-bound 1GB per core 1GB per core no 1-2 GB No
4 - Match Making (Yes=WMS can find a suitable resource, No = I select the resource )
No No No Yes (no preinstalled exe) No Yes
5 - Code Developer (P=personal ,OS=OpenSource, C=Commercial, ...)
OS+P OS+P P+OS OS OS OS
6 - Compiler/Version needed on the WN (No=compiled on the UI, gcc/g++, icc, Java ..)
gcc-c++ f90, gcc-c++ NO NO No No
7 - Libraries/version needed on the WN (COMPILE time) (no=compiled on the UI, Blas, Lapack, Gsl, ..)
cfitsio blas, lapack, gsl, hdf5, fftw3 if compiled, netcdf no no no
8 - Libraries needed on the WN (EXECUTION time) (Blas, Lapack, Gsl, ..)
cfitsio blas, lapack, gsl, hdf5, fftw3 no (netcdf statically linked) no no no
9 - Interpreter needed on the WN (Python, perl, ..)
no no Pyhton wrapper created No no no
10 - Applications needed on the WN. Specify version if important (QE, gaussian,..)
no no no no QE-yes no
11 - Large amount of Data (No, 10GB Input, 20-30 GB output)
No 20GB output 10GB input 10GB output 10 GB output 100GB
12 - Data Intensive (No, SAN=High speed SAN, Local=Local scratch disks, .. )
No SAN No No SAN/Local No
13 - Expected Execution time (No=within a few hours, 24-48h, 72h or more )
? >72h >72h >3 weeks 72 or more 72 or mode
14 - Checkpoints (No, Yes=I need a safe local storage area to save CheckPoints )
No Yes can continue on different sites No, output is retrieved via SE Yes, on the same site No, files are saved to custom storage via OpenDAP
15 - Communication Intensive (No, Infiniband, ... )
No Infiniband no (single node) infiniband if more than 3 physical nodes used IB no
16 - Web portal (No=not needed, D=yes for Data management, CI= yes with Custmized Interface, ... )
CI CI CI No No D
>
>
GAIA Einstein-Tk NEMO NAMD QuantumEpresso RegCM
1 Code Developer - E.g.: P(=personal) ,OS(=OpenSource), C(=Commercial), ...
OS+P OS+P OS+P OS OS OS
2 Parallelization Model - E.g.: MPI, openMP, Hybrid, GPU, ..
MPI/openMP MPI/openMP MPI/openMP MPI/openMP MPI/openMP GPU MPI
3 CPU requirements - E.g.: 1-10 WholeNodes, 16-24 CPUs, ..
8-64 WholeNodes 1-64 WholeNodes 1 or more WholeNode Node 1-1024 8-128 WholeNodes 1 WholeNode
4 Memory requirements - E.g.: No, 1-2 GB per core, Memory-Bound(=whole avail. mem.), ..
Mem-bound 1GB per core 1GB per core no 1-2 GB No
5 Match Making - Yes(wms can find a suitable resource),  No( I select the resource)
No No No Yes (no preinstalled exe) No Yes
6 Compiler/Version needed on the WN - E.g.: No=compiled on the UI, gcc/g++, icc, Java ..)
gcc-c++ f90, gcc-c++ NO NO No No
7 Libraries/version needed on the WN (COMPILE time) - E.g.: no(=compiled on the UI), Blas, Lapack, Gsl, ..
cfitsio blas, lapack, gsl, hdf5, fftw3 if compiled, netcdf no no no
8 Libraries needed on the WN (EXECUTION time) - E.g.: Blas, Lapack, Gsl, ..
cfitsio blas, lapack, gsl, hdf5, fftw3 no (netcdf statically linked) no no no
9 Interpreter needed on the WN - E.g.: Python, perl, ..
no no Pyhton wrapper created No no no
10 Applications on the WN - Name and version (if important) of a needed Application (QE, gaussian,..)
no no no no QE-latest-vers no
11 Large amount of Data - E.g.: No, 10GB Input, 20-30 GB output, ...
No 20GB output 10GB input 10GB output 10 GB output 100GB
12 Data Intensive - E.g.: No(=don't care), SAN(=Shared High speed SAN), Local(=1 Local scratch disk per Node, .. )
No SAN No No SAN/Local No, files are saved to custom storage via OpenDAP
13 Expected Execution time - E .g.: No=within a few hours, 24-48h, 72h or more,..
? >72h >72h >3 weeks 72 or more 72 or mode
14 Checkpoints - E.g.: No(=don't care) Yes(=I need a safe local storage area to save CheckPoints )
No Yes can continue on different sites No, output is retrieved via SE Yes, on the same site No, files are saved to custom storage via OpenDAP
15 Communication Intensive - E.g.: No (=don't care) , IB(=Infiniband needed) , ...
No IB No IB if more than 3 physical nodes used IB no
16 Web portal - E.g.: No(not needed), D(=yes for Data management), CI ( yes with Custmized Interface), CHK=(Checkpoint support)...
CI CI CI No No D
 
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