Difference: Applications (18 vs. 19)

Revision 192012-10-13 - RobertoAlfieri

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MPI-multicore: Applications

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Requirements Outline:

Changed:
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GAIA Einstein-Tk NEMO NAMD QuantumEpresso RegCM
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Sorted ascending
1 - Parallelization Model (MPI, openMP, Hybrid, GPU, .. )
10 - Applications needed on the WN. Specify version if important (QE, gaussian,..)
No 20GB output 10GB input 10GB output 10 GB output 100GB
11 - Large amount of Data (No, 10GB Input, 20-30 GB output)
12 - Data Intensive (No, SAN=High speed SAN, Local=Local scratch disks, .. )
13 - Expected Execution time (No=within a few hours, 24-48h, 72h or more )
14 - Checkpoints (No, Yes=I need a safe local storage area to save CheckPoints )
15 - Communication Intensive (No, Infiniband, ... )
16 - Web portal (No=not needed, D=yes for Data management, CI= yes with Custmized Interface, ... )
2- CPU requirements (1-10 WholeNodes, 16-24 CPUs, ..)
3 - Memory requirements ( No, 1-2 GB per core, Memory-Bound=whole avail. mem. )
4 - Match Making (Yes=WMS can find a suitable resource, No = I select the resource )
5 - Code Developer (P=personal ,OS=OpenSource, C=Commercial, ...)
6 - Compiler/Version needed on the WN (No=compiled on the UI, gcc/g++, icc, Java ..)
7 - Libraries/version needed on the WN (COMPILE time) (no=compiled on the UI, Blas, Lapack, Gsl, ..)
? >72h >72h >3 weeks 72 or more 72 or mode
8 - Libraries needed on the WN (EXECUTION time) (Blas, Lapack, Gsl, ..)
9 - Interpreter needed on the WN (Python, perl, ..)
CI CI CI No No D
MPI/openMP MPI/openMP MPI/openMP MPI/openMP MPI/openMP GPU MPI
Mem-bound 1GB per core 1GB per core no 1-2 GB No
gcc-c++ f90, gcc-c++ NO NO No No
cfitsio blas, lapack, gsl, hdf5, fftw3 if compiled, netcdf no no no
cfitsio blas, lapack, gsl, hdf5, fftw3 no (netcdf statically linked) no no no
no no Pyhton wrapper created No no no
no no no no QE-yes no
No SAN No No SAN/Local No
No Infiniband no (single node) infiniband if more than 3 physical nodes used IB no
No Yes can continue on different sites No, output is retrieved via SE Yes, on the same site No, files are saved to custom storage via OpenDAP
OS+P OS+P P+OS OS OS OS
8-64 WholeNodes 1-64 WholeNodes SingleNode or Multinode with SharedHome 1-1024 WholeNodes 8-128 WN 1
No No No Yes (no preinstalled exe) No Yes
>
>
GAIA Einstein-Tk NEMO NAMD QuantumEpresso RegCM
1 Code Developer - E.g.: P(=personal) ,OS(=OpenSource), C(=Commercial), ...
OS+P OS+P OS+P OS OS OS
2 Parallelization Model - E.g.: MPI, openMP, Hybrid, GPU, ..
MPI/openMP MPI/openMP MPI/openMP MPI/openMP MPI/openMP GPU MPI
3 CPU requirements - E.g.: 1-10 WholeNodes, 16-24 CPUs, ..
8-64 WholeNodes 1-64 WholeNodes 1 or more WholeNode Node 1-1024 8-128 WholeNodes 1 WholeNode
4 Memory requirements - E.g.: No, 1-2 GB per core, Memory-Bound(=whole avail. mem.), ..
Mem-bound 1GB per core 1GB per core no 1-2 GB No
5 Match Making - Yes(wms can find a suitable resource),  No( I select the resource)
No No No Yes (no preinstalled exe) No Yes
6 Compiler/Version needed on the WN - E.g.: No=compiled on the UI, gcc/g++, icc, Java ..)
gcc-c++ f90, gcc-c++ NO NO No No
7 Libraries/version needed on the WN (COMPILE time) - E.g.: no(=compiled on the UI), Blas, Lapack, Gsl, ..
cfitsio blas, lapack, gsl, hdf5, fftw3 if compiled, netcdf no no no
8 Libraries needed on the WN (EXECUTION time) - E.g.: Blas, Lapack, Gsl, ..
cfitsio blas, lapack, gsl, hdf5, fftw3 no (netcdf statically linked) no no no
9 Interpreter needed on the WN - E.g.: Python, perl, ..
no no Pyhton wrapper created No no no
10 Applications on the WN - Name and version (if important) of a needed Application (QE, gaussian,..)
no no no no QE-latest-vers no
11 Large amount of Data - E.g.: No, 10GB Input, 20-30 GB output, ...
No 20GB output 10GB input 10GB output 10 GB output 100GB
12 Data Intensive - E.g.: No(=don't care), SAN(=Shared High speed SAN), Local(=1 Local scratch disk per Node, .. )
No SAN No No SAN/Local No, files are saved to custom storage via OpenDAP
13 Expected Execution time - E .g.: No=within a few hours, 24-48h, 72h or more,..
? >72h >72h >3 weeks 72 or more 72 or mode
14 Checkpoints - E.g.: No(=don't care) Yes(=I need a safe local storage area to save CheckPoints )
No Yes can continue on different sites No, output is retrieved via SE Yes, on the same site No, files are saved to custom storage via OpenDAP
15 Communication Intensive - E.g.: No (=don't care) , IB(=Infiniband needed) , ...
No IB No IB if more than 3 physical nodes used IB no
16 Web portal - E.g.: No(not needed), D(=yes for Data management), CI ( yes with Custmized Interface), CHK=(Checkpoint support)...
CI CI CI No No D
 
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