Line: 1 to 1 | ||||||||
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Line: 463 to 463 | ||||||||
Creation of a new MPI wrapper | ||||||||
Changed: | ||||||||
< < | Add in /opt/i2g/etc/mpi-start/ the definition of a new MPI wrapper for OpenFoam-2.0.1. | |||||||
> > | Add in /etc/mpi-start/ the definition of a new MPI wrapper for OpenFoam-2.0.1. | |||||||
This wrapper has to be replicated in all the LSF client nodes.
| ||||||||
Line: 613 to 613 | ||||||||
echo "+ Done at "`date` | ||||||||
Deleted: | ||||||||
< < | Submission$ glite-wms-job-submit -a -r grid012.ct.infn.it:2119/jobmanager-lcglsf-short -e https://wmsdecide.dir.garr.it:7443/glite_wms_wmproxy_server -o jobID openfoam-2.0.1.jdl Connecting to the service https://wmsdecide.dir.garr.it:7443/glite_wms_wmproxy_server ===================== glite-wms-job-submit Success ===================== The job has been successfully submitted to the WMProxy Your job identifier is: https://lb-4.dir.garr.it:9000/vUAJk3Sq3xBnviahz7HSqg The job identifier has been saved in the following file: /home/larocca/OpenFoam-2.0.1/jobID ===================================================================== Checking Status$ glite-wms-job-status --noint -i jobID ====================== glite-wms-job-status Success ==================== BOOKKEEPING INFORMATION: Status info for the Job : https://lb-4.dir.garr.it:9000/vUAJk3Sq3xBnviahz7HSqg Current Status: Done (Success) Exit code: 0 Status Reason: Job terminated successfully Destination: grid012.ct.infn.it:2119/jobmanager-lcglsf-short Submitted: Fri Dec 2 16:59:56 2011 CET ===================================================================== Downloading Results$ glite-wms-job-output --dir . --noint -i jobID Connecting to the service https://wmsdecide.dir.garr.it:7443/glite_wms_wmproxy_server =============================================================================== JOB GET OUTPUT OUTCOME Output sandbox files for the job: https://lb-4.dir.garr.it:9000/vUAJk3Sq3xBnviahz7HSqg have been successfully retrieved and stored in the directory: /home/larocca/OpenFoam-2.0.1/larocca_vUAJk3Sq3xBnviahz7HSqg ================================================================================ | |||||||
JDL & script files (parallel mode)This is an example of JDL file that can be used for testing OpenFoam in parallel mode: | ||||||||
Line: 676 to 625 | ||||||||
Arguments = "icoFoam OPENMPI_OPENFOAM"; StdOutput = "mpi-start.out"; StdError = "mpi-start.err"; | ||||||||
Changed: | ||||||||
< < | InputSandbox = {"mpi-start-wrapper.sh","bei-hooks.sh","cavity.tar.gz"}; | |||||||
> > | InputSandbox = {"mpi-start-wrapper.sh","bei-hooks.sh"}; | |||||||
OutputSandbox = {"mpi-start.err","mpi-start.out","results.tgz"}; Environment = {"I2G_MPI_PRE_RUN_HOOK=./bei-hooks.sh","I2G_MPI_POST_RUN_HOOK=./bei-hooks.sh"}; Requirements = Member("VO-gridit-OpenFoam-2.0.1",other.GlueHostApplicationSoftwareRunTimeEnvironment); | ||||||||
Line: 763 to 712 | ||||||||
echo echo "=[PRE_RUN_HOOK] Started" echo "- Downloading tar archive from SE..." | ||||||||
Changed: | ||||||||
< < | #echo lcg-cp --vo $OUTPUT_VO $OUTPUT_SE/pitz.tgz file:$PWD/pitz.tgz #lcg-cp --vo $OUTPUT_VO $OUTPUT_SE/pitz.tgz file:$PWD/pitz.tgz | |||||||
> > | echo lcg-cp --vo $OUTPUT_VO $OUTPUT_SE/cavity.tar.gz file:$PWD/cavity.tar.gz lcg-cp --vo $OUTPUT_VO $OUTPUT_SE/cavity.tar.gz file:$PWD/cavity.tar.gz | |||||||
tar zxf cavity.tar.gz echo;echo "- Summarizing disk usage of each FILE, recursively for directories" du -h cavity | ||||||||
Line: 787 to 736 | ||||||||
# copy the results data on master node CMD="scp -r $1:\"$PWD\" .." | ||||||||
Deleted: | ||||||||
< < | #CMD="scp -r $1:\"$PWD\" ./$1" | |||||||
echo "- Copying file from remote host [" $1 "]" echo $CMD $CMD | ||||||||
Line: 795 to 743 | ||||||||
post_run_hook () { echo "=[POST_RUN_HOOK] Started" | ||||||||
Deleted: | ||||||||
< < | #echo "post_run_hook called" | |||||||
if [ "x$MPI_START_SHARED_FS" == "x0" ] ; then echo "- Gathering output results from remote hosts [FS=0]" | ||||||||
Line: 810 to 757 | ||||||||
echo; echo "- Listing the contents of directories in a tree-like format" tree -L 3 echo "- Packing the final results data" | ||||||||
Deleted: | ||||||||
< < | #cd $OUTPUT_DIR | |||||||
cd .. tar czf $OUTPUT_ARCHIVE $OUTPUT_DIR if [ $? -eq 0 ] ; then |